BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018E03SP1|AL427324
(982 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1042 1886 0.0
>3x_Contig1042
Length = 3616
Score = 1886 bits (947), Expect = 0.0
Identities = 973/983 (98%), Gaps = 2/983 (0%)
Strand = Plus / Plus
Query: 1 gatccattccattccttcctagcaggatcaatcgc-ggtgctatagaagcctccatcact 59
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 853 gatccattccattccttcctagcaggatcaatcgcaggtgctatagaagcctccatcact 912
Query: 60 tatcctttcgagtttgccaaaacgaggttacagttggtggataaggctagtmaagcttcc 119
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 913 tatcctttcgagtttgccaaaacgaggttacagttggtggataaggctagtaaagcttcc 972
Query: 120 agaaatccattggttctaatatacaatacgggtaagamctacggtatttcatccatttac 179
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 973 agaaatccattggttctaatatacaatacgggtaagaactacggtatttcatccatttac 1032
Query: 180 gtcggttgtccagctttcatcgttggtaacacagcaaaggccggtattagatttcttggg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 gtcggttgtccagctttcatcgttggtaacacagcaaaggccggtattagatttcttggg 1092
Query: 240 ttcgacacaatcaagaacttgcttcgagacaagaagaccggtgagttgagtggatttaga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 ttcgacacaatcaagaacttgcttcgagacaagaagaccggtgagttgagtggatttaga 1152
Query: 300 ggtgttgttgccgggttaggtgcaggtttgttggaatcggtcgtggctgtgactccattc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 ggtgttgttgccgggttaggtgcaggtttgttggaatcggtcgtggctgtgactccattc 1212
Query: 360 gaagccatcaagactgcattgatcgatgataagcaagcygctgtgccaaaatatcaaaat 419
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1213 gaagccatcaagactgcattgatcgatgataagcaagctgctgtgccaaaatatcaaaat 1272
Query: 420 aacgggaaaggtatggtgagcaattatgctaagcttttatccgatcaaggattttctggt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1273 aacgggaaaggtatggtgagcaattatgctaagcttttatccgatcaaggattttctggt 1332
Query: 480 ctttatagaggtgtcttaccagtttccatgagacaagctgcaaatcaagccgttagattg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1333 ctttatagaggtgtcttaccagtttccatgagacaagctgcaaatcaagccgttagattg 1392
Query: 540 ggttgttataacaagatcaagactttggtgcaagattacacaaacgtacctaaggrtaaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1393 ggttgttataacaagatcaagactttggtgcaagattacacaaacgtacctaaggataaa 1452
Query: 600 cctttgagttcaggtttgaccttcattgtaggtgccttcagtggtatcgttaccgtttat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1453 cctttgagttcaggtttgaccttcattgtaggtgccttcagtggtatcgttaccgtttat 1512
Query: 660 acgacaatgcctatcgataccgttaagacaagaatgcsatctttgaatgccggccaatat 719
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 1513 acgacaatgcctatcgataccgttaagacaagaatgcaatctttgaatgcaggccaatat 1572
Query: 720 tcttctactattaactgtttcgctaccattttcaaggaggaaggtttgaagactttctgg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1573 tcttctactattaactgtttcgctaccattttcaaggaggaaggtttgaagactttctgg 1632
Query: 780 aaaggtgctactccaagattgggtagattgatcctttctggtggtattgtcttcaccatc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1633 aaaggtgctactccaagattgggtagattgatcctttctggtggtattgtcttcaccatc 1692
Query: 840 tatgagaaggtattgacggttttggcataattagcctttcagctttcttagtgtgt-ama 898
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 1693 tatgagaaggtattgacggttttggcataattagcctttcagctttcttagtgtgtaaca 1752
Query: 899 aacgtgtagtttacttataaaacaaaaaatactaaacgataatcttaatccgcatcataa 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1753 aacgtgtagtttacttataaaacaaaaaatactaaacgataatcttaatccgcatcataa 1812
Query: 959 agatgatcggccatttgatgrga 981
|||||||||||||||||||| ||
Sbjct: 1813 agatgatcggccatttgatgaga 1835
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6327
Number of Sequences: 1807
Number of extensions: 6327
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 982
length of database: 10,358,551
effective HSP length: 16
effective length of query: 966
effective length of database: 10,329,639
effective search space: 9978431274
effective search space used: 9978431274
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)